Dr Christopher O'Shea PhD

Chris O'Shea

Department of Cardiovascular Sciences
Henry Wellcome Fellow

Contact details

Address
College of Medicine and Health
University 麻豆精选
Edgbaston
Birmingham
B15 2TT
UK

Dr O’Shea is a Research Associate at Cardiovascular Sciences. His primary research goal is to use computer sciences and physics to achieve detailed mechanistic understanding of cardiac arrhythmias. His work has resulted in open-source software for analysis of pre-clinical mapping datasets, which has been utilised in several laboratories worldwide and extensively covered in international press. 

Dr O’Shea has been awarded a Sir Henry Wellcome Postdoctoral Fellowship to develop novel computational approaches for human cardiac mapping data, in collaboration with University 麻豆精选, King’s College London, George Washington University and clinical centres in the UK and Germany. During this Fellowship, Dr O’Shea will utilise clinical, pre-clinical and computationally modelled datasets and advanced processing and analysis techniques, including cutting edge computational approaches to develop new analysis tools, and further understanding of atrial fibrillation. 

Qualifications

  • PhD in Physical Sciences for Health, University 麻豆精选 2020
  • MSc in Physical Sciences for Health, University 麻豆精选 2016
  • Mphys (Hons) in Physics, University of Bath 2015

Biography

Dr O’Shea graduated with a first class MPhys honours degree in Physics from the University of Bath in 2015.

Dr O’Shea then moved to the University 麻豆精选 to join the Engineering and Physical Sciences Research Centre (EPSRC) funded Physical Sciences for Health doctoral training centre. He completed his PhD in 2020 under the supervision of Dr Davor Pavlovic, Professor Larissa Fabritz (Institute of Cardiovascular Sciences) and Dr Kashif Rajpoot (School of Computer Science). Chris worked on development of novel processing tools and methods for cardiac optical mapping, and application of these tools to dissect molecular mechanisms of cardiac arrhythmias.

In December 2019, Dr O’Shea was awarded a Sir Henry Wellcome Postdoctoral Fellowship from the Wellcome Trust. Chris will work with Dr Davor Pavlovic, and to develop novel computational approaches for human cardiac mapping data and apply these methods to further treatment of atrial fibrillation. 

Teaching

MBChB Year 2 Cardiovascular System

Research

Dr O’Shea’s research focus is the use of a multi-disciplinary approach, combining computer sciences and physics, to achieve detailed understanding of cardiac arrythmias. Dr O’Shea’s research centres around electroanatomical mapping technologies, used to treat arrhythmias in the clinic, and pre-clinical optical mapping. 

Novel computational approaches for human cardiac mapping data

Electroanatomical mapping is a staple in electrophysiological clinics worldwide. Mapping provides high resolution recording of electrical activity in the heart, and over ten thousand ablation procedures (burning/freezing of cardiac tissue to treat arrhythmia) use mapping technologies in the UK each year. However, very little of this data is used for research and despite the use of the mapping data, many ablation procedures fail, and arrhythmia recurs.

Development of novel and open-source computational tools, using state of the art techniques including artificial intelligence approaches, will further our ability of effectively access and analyse mapping data. This will enable the use of this valuable clinical data to further our knowledge of cardiac arrythmias and how we can best prevent and treat their occurrence. Ultimately, this will allow us to advance treatment of arrythmias such as atrial fibrillation and ventricular tachycardia, improving patient quality of life and reducing stroke, heart attack and sudden death.

Cardiac Optical Mapping

Optical mapping is a pre-clinical fluorescence-based technique that is used to visualise cardiac action potentials and calcium handling at a spatial resolution that is unmatched by other techniques. It has hence revolutionised many areas of cardiac electrophysiology. Our recent work involved the development of open-source software for analysis of the complex datasets produced during optical mapping experiments and has been used by ourselves and several groups worldwide of gain novel insights into arrhythmogenesis.

Research groups and centres

Publications

For most up to data full publications list please visit .

O'Shea C, Winter J, Holmes AP, Johnson DM, Correia JN, Kirchhof P, Fabritz L, Rajpoot K, Pavlovic D. Prog Biophys Mol Biol. 2020 Nov;157:84-93. doi: 10.1016/j.pbiomolbio.2019.12.004. Epub 2019 Dec 30. PubMed PMID: 31899215; PubMed Central PMCID: PMC7607254.

O'Shea C, Kabir SN, Holmes AP, Lei M, Fabritz L, Rajpoot K, Pavlovic D. Int J Biochem Cell Biol. 2020 Sep;126:105804. doi: 10.1016/j.biocel.2020.105804. Epub 2020 Jul 15. PubMed PMID: 32681973; PubMed Central PMCID: PMC7456775.

Mendonca Costa C, Anderson GC, Meijborg VMF, O'Shea C, Shattock MJ, Kirchhof P, Coronel R, Niederer S, Pavlovic D, Dhanjal T, Winter J. Front Physiol. 2020;11:465. doi: 10.3389/fphys.2020.00465. eCollection 2020. PubMed PMID: 32508676; PubMed Central PMCID: PMC7248250.

O'Shea C, Pavlovic D, Rajpoot K, Winter J. Front Physiol. 2019;10:1295. doi: 10.3389/fphys.2019.01295. eCollection 2019. PubMed PMID: 31681008; PubMed Central PMCID: PMC6798176.

Dong R*, Mu-U-Min R*, Reith AJM*, O'Shea C*, He S, Duan K, Kou K, Grassam-Rowe A, Tan X, Pavlovic D, Ou X, Lei M. Front Physiol. 2019;10:954. doi: 10.3389/fphys.2019.00954. eCollection 2019. PubMed PMID: 31456689; PubMed Central PMCID: PMC6698704. *Joint first authors

O'Shea C, Holmes AP, Yu TY, Winter J, Wells SP, Parker BA, Fobian D, Johnson DM, Correia J, Kirchhof P, Fabritz L, Rajpoot K, Pavlovic D. J Vis Exp. 2019 Jun 4;(148). doi: 10.3791/59663. PubMed PMID: 31233017.

O'Shea C, Holmes AP, Winter J, Correia J, Ou X, Dong R, He S, Kirchhof P, Fabritz L, Rajpoot K, Pavlovic D. Front Physiol. 2019;10:182. doi: 10.3389/fphys.2019.00182. eCollection 2019. Review. PubMed PMID: 30899227; PubMed Central PMCID: PMC6416196.

O'Shea C, Holmes AP, Yu TY, Winter J, Wells SP, Correia J, Boukens BJ, De Groot JR, Chu GS, Li X, Ng GA, Kirchhof P, Fabritz L, Rajpoot K, Pavlovic D. Sci Rep. 2019 Feb 4;9(1):1389. doi: 10.1038/s41598-018-38263-2. PubMed PMID: 30718782; PubMed Central PMCID: PMC6362081

Wen Q, Gandhi K, Capel RA, Hao G, O'Shea C, Neagu G, Pearcey S, Pavlovic D, Terrar DA, Wu J, Faggian G, Camelliti P, Lei M. J Physiol. 2018 Sep;596(17):3951-3965. doi: 10.1113/JP276239. Epub 2018 Jul 26. PubMed PMID: 29928770; PubMed Central PMCID: PMC6117587.

Winter J, Bishop MJ, Wilder CDE, O'Shea C, Pavlovic D, Shattock MJ. Front Physiol. 2018;9:16. doi: 10.3389/fphys.2018.00016. eCollection 2018. PubMed PMID: 29410631; PubMed Central PMCID: PMC5787134